Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs67166000 chr3:125752136 AAGAGAAGCCTGTTAGCACTGTGCAGTCCATGAGAC/A cg26321609 chr3:123680480 CCDC14 -1.16 -25.85 -0.8 9.29E-86 Box Plot
BLCA rs6764781 chr3:125765624 A/G cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs6778845 chr3:125762636 C/T cg26321609 chr3:123680480 CCDC14 1.11 24.08 0.78 1.77E-78 Box Plot
BLCA rs6789129 chr3:125762352 T/A cg26321609 chr3:123680480 CCDC14 1.11 24.08 0.78 1.77E-78 Box Plot
BLCA rs6806332 chr3:125763566 A/G cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs6806350 chr3:125763632 A/G cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs6806467 chr3:125763734 A/G cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs692156 chr11:50391155 T/C cg15704280 chr7:45808275 SEPT13 -1.02 -24.4 -0.78 8.56E-80 Box Plot
BLCA rs692671 chr11:50372174 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.94 -0.79 5.25E-82 Box Plot
BLCA rs7103645 chr11:50228664 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.73 -0.79 3.86E-81 Box Plot
BLCA rs7131537 chr11:50378965 T/G cg15704280 chr7:45808275 SEPT13 -1.03 -24.94 -0.79 5.26E-82 Box Plot
BLCA rs71327748 chr3:125746967 G/T cg26321609 chr3:123680480 CCDC14 -1.16 -26.26 -0.8 2.03E-87 Box Plot
BLCA rs71481227 chr11:50304124 C/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.12 -0.78 1.22E-78 Box Plot
BLCA rs71534843 chr6:66788094 C/T cg15611600 chr13:45563400 KIAA1704;NUFIP1 -1.08 -25.18 -0.79 5.38E-83 Box Plot
BLCA rs7293968 chr11:50385154 G/A cg15704280 chr7:45808275 SEPT13 -1.02 -24.5 -0.78 3.24E-80 Box Plot